Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Rer1Q9CQU3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Gm9013-201ENSMUST00000132939 882 ntBASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Sybu-209ENSMUST00000228639 4113 ntBASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rer1Q9CQU3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rer1Q9CQU3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rer1Q9CQU3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Rer1Q9CQU3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rer1Q9CQU3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rer1Q9CQU3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rer1Q9CQU3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rer1Q9CQU3 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms