Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Q9CQC3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.32■□□□□ 0.2
Q9CQC3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Q9CQC3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.32■□□□□ 0.2
Q9CQC3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.32■□□□□ 0.2
Q9CQC3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.32■□□□□ 0.2
Q9CQC3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q9CQC3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q9CQC3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Q9CQC3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.31■□□□□ 0.2
Q9CQC3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.31■□□□□ 0.2
Q9CQC3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Q9CQC3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.31■□□□□ 0.2
Q9CQC3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.31■□□□□ 0.2
Q9CQC3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.31■□□□□ 0.2
Q9CQC3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.31■□□□□ 0.2
Q9CQC3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Q9CQC3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Q9CQC3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q9CQC3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Q9CQC3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Q9CQC3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Q9CQC3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.3■□□□□ 0.2
Q9CQC3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.3■□□□□ 0.2
Q9CQC3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Q9CQC3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Gm19164-201ENSMUST00000210667 640 ntBASIC16.3■□□□□ 0.2
Q9CQC3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Q9CQC3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.3■□□□□ 0.2
Q9CQC3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q9CQC3 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.3■□□□□ 0.2
Q9CQC3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Q9CQC3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.29■□□□□ 0.2
Q9CQC3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Q9CQC3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.29■□□□□ 0.2
Q9CQC3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.29■□□□□ 0.2
Q9CQC3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.29■□□□□ 0.2
Q9CQC3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Q9CQC3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Q9CQC3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CQC3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms