Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpa3Q9CQ71 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa3Q9CQ71 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rpa3Q9CQ71 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpa3Q9CQ71 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.64■□□□□ 0.26
Rpa3Q9CQ71 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Gm12644-201ENSMUST00000119935 606 ntBASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Gm10819-201ENSMUST00000099988 561 ntBASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rpa3Q9CQ71 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rpa3Q9CQ71 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm8825-201ENSMUST00000182565 998 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm4518-201ENSMUST00000182638 718 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rpa3Q9CQ71 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa3Q9CQ71 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rpa3Q9CQ71 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms