Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34aQ99PP6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Mir1895-201ENSMUST00000122615 79 ntBASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Auts2-212ENSMUST00000178555 309 ntBASIC19.34■□□□□ 0.69
Trim34aQ99PP6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Gm27494-201ENSMUST00000184735 189 ntBASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.34■□□□□ 0.69
Trim34aQ99PP6 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim34aQ99PP6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim34aQ99PP6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Gm5177-201ENSMUST00000183092 997 ntBASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Gm27301-201ENSMUST00000184012 127 ntBASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Gm8396-201ENSMUST00000057361 823 ntBASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim34aQ99PP6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Gm45747-201ENSMUST00000212203 999 ntBASIC19.32■□□□□ 0.68
Trim34aQ99PP6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.32■□□□□ 0.68
Trim34aQ99PP6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim34aQ99PP6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.31■□□□□ 0.68
Trim34aQ99PP6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim34aQ99PP6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms