Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh23Q99PF4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cdh23Q99PF4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.93■□□□□ 0.14
Cdh23Q99PF4 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.93■□□□□ 0.14
Cdh23Q99PF4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh23Q99PF4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh23Q99PF4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.91■□□□□ 0.14
Cdh23Q99PF4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 AY702102-202ENSMUST00000194651 1173 ntBASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Gm6415-201ENSMUST00000118488 348 ntBASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh23Q99PF4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.9■□□□□ 0.14
Cdh23Q99PF4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh23Q99PF4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Gm13015-201ENSMUST00000118674 204 ntBASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh23Q99PF4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdh23Q99PF4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh23Q99PF4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdh23Q99PF4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdh23Q99PF4 Syt7-204ENSMUST00000223586 1344 ntBASIC15.88■□□□□ 0.13
Cdh23Q99PF4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms