Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.3■□□□□ 0.04
Rnf111Q99ML9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rnf111Q99ML9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rnf111Q99ML9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Gm11950-201ENSMUST00000121615 838 ntBASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rnf111Q99ML9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rnf111Q99ML9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms