Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Mir3113-201ENSMUST00000175478 76 ntBASIC13.78□□□□□ -0.2
Scrt1Q99M85 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.78□□□□□ -0.2
Scrt1Q99M85 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.78□□□□□ -0.2
Scrt1Q99M85 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.78□□□□□ -0.2
Scrt1Q99M85 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scrt1Q99M85 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scrt1Q99M85 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Chchd1-203ENSMUST00000224633 557 ntBASIC13.77□□□□□ -0.21
Scrt1Q99M85 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scrt1Q99M85 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.76□□□□□ -0.21
Scrt1Q99M85 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.76□□□□□ -0.21
Scrt1Q99M85 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scrt1Q99M85 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scrt1Q99M85 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms