Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.55■□□□□ 0.24
Clp1Q99LI9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clp1Q99LI9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clp1Q99LI9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clp1Q99LI9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.54■□□□□ 0.24
Clp1Q99LI9 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.54■□□□□ 0.24
Clp1Q99LI9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.54■□□□□ 0.24
Clp1Q99LI9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clp1Q99LI9 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.53■□□□□ 0.24
Clp1Q99LI9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.53■□□□□ 0.24
Clp1Q99LI9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Grk6-207ENSMUST00000225925 2769 ntBASIC16.53■□□□□ 0.24
Clp1Q99LI9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clp1Q99LI9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22065-201ENSMUST00000103753 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22066-201ENSMUST00000103761 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24932-201ENSMUST00000103763 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24115-201ENSMUST00000103799 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22190-201ENSMUST00000103827 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22191-201ENSMUST00000103831 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24721-201ENSMUST00000103849 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm28018-201ENSMUST00000103869 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm26399-201ENSMUST00000103937 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clp1Q99LI9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22175-201ENSMUST00000175007 78 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm25349-201ENSMUST00000177728 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm23616-201ENSMUST00000177797 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm25871-201ENSMUST00000177816 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24752-201ENSMUST00000178240 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24496-201ENSMUST00000178287 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm25649-201ENSMUST00000178476 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm25548-201ENSMUST00000178681 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm23147-201ENSMUST00000178841 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm26095-201ENSMUST00000179270 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22171-201ENSMUST00000179283 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm23936-201ENSMUST00000179354 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm22619-201ENSMUST00000179516 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm25255-201ENSMUST00000179579 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm24755-201ENSMUST00000179691 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm26506-201ENSMUST00000179692 110 ntBASIC16.52■□□□□ 0.24
Clp1Q99LI9 Gm25086-201ENSMUST00000179931 110 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms