Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.54■□□□□ 0.08
Clcc1Q99LI2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Clcc1Q99LI2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gm13036-201ENSMUST00000117799 748 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gm12260-201ENSMUST00000122447 411 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gm27628-201ENSMUST00000184911 107 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Psmb5-202ENSMUST00000227257 622 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Clcc1Q99LI2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Gm11779-201ENSMUST00000118541 368 ntBASIC15.52■□□□□ 0.08
Clcc1Q99LI2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.52■□□□□ 0.08
Clcc1Q99LI2 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Clcc1Q99LI2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcc1Q99LI2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcc1Q99LI2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcc1Q99LI2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcc1Q99LI2 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcc1Q99LI2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Clcc1Q99LI2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gm37935-201ENSMUST00000192012 982 ntBASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Clcc1Q99LI2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms