Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf34Q99KR6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf34Q99KR6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf34Q99KR6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rnf34Q99KR6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf34Q99KR6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Mir5130-201ENSMUST00000175160 84 ntBASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm37055-201ENSMUST00000191866 133 ntBASIC16.93■□□□□ 0.3
Rnf34Q99KR6 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.93■□□□□ 0.3
Rnf34Q99KR6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.93■□□□□ 0.3
Rnf34Q99KR6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf34Q99KR6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf34Q99KR6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Rnf34Q99KR6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf34Q99KR6 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rnf34Q99KR6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms