Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfc4Q99J62 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc4Q99J62 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc4Q99J62 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfc4Q99J62 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.08■□□□□ 0.49
Rfc4Q99J62 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Gm13597-201ENSMUST00000121239 375 ntBASIC18.08■□□□□ 0.48
Rfc4Q99J62 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.08■□□□□ 0.48
Rfc4Q99J62 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.08■□□□□ 0.48
Rfc4Q99J62 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfc4Q99J62 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfc4Q99J62 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.06■□□□□ 0.48
Rfc4Q99J62 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.06■□□□□ 0.48
Rfc4Q99J62 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.06■□□□□ 0.48
Rfc4Q99J62 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.06■□□□□ 0.48
Rfc4Q99J62 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.06■□□□□ 0.48
Rfc4Q99J62 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfc4Q99J62 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.05■□□□□ 0.48
Rfc4Q99J62 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms