Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Gm13168-201ENSMUST00000121771 632 ntBASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Thumpd1Q99J36 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Mir5122-201ENSMUST00000175004 89 ntBASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.05□□□□□ -0.16
Thumpd1Q99J36 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Thumpd1Q99J36 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Thumpd1Q99J36 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Gm10566-201ENSMUST00000086739 996 ntBASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Thumpd1Q99J36 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms