Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Gm13616-201ENSMUST00000120600 222 ntBASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Mir6990-201ENSMUST00000183724 91 ntBASIC18.84■□□□□ 0.61
Sf3b3Q921M3 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sf3b3Q921M3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b3Q921M3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Gm18889-201ENSMUST00000174284 929 ntBASIC18.82■□□□□ 0.6
Sf3b3Q921M3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.82■□□□□ 0.6
Sf3b3Q921M3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Rprl2-201ENSMUST00000157150 290 ntBASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b3Q921M3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b3Q921M3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms