Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Rps4l-201ENSMUST00000071745 943 ntBASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha9Q91Y11 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Gm6296-201ENSMUST00000222599 943 ntBASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha9Q91Y11 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdha9Q91Y11 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gm11780-201ENSMUST00000136880 516 ntBASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdha9Q91Y11 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Prob1-201ENSMUST00000097619 3021 ntBASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdha9Q91Y11 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms