Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhga11Q91XY8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Gm7284-201ENSMUST00000131667 944 ntBASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhga11Q91XY8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhga11Q91XY8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhga11Q91XY8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Mir6404-201ENSMUST00000183699 94 ntBASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Gm29518-201ENSMUST00000190858 372 ntBASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms