Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Gm15165-201ENSMUST00000118140 502 ntBASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga4Q91XY4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga4Q91XY4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Gm24589-201ENSMUST00000116692 94 ntBASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga4Q91XY4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga4Q91XY4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Gm12644-201ENSMUST00000119935 606 ntBASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Gm43347-201ENSMUST00000200226 580 ntBASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhga4Q91XY4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms