Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm8825-201ENSMUST00000182565 998 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm4518-201ENSMUST00000182638 718 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.55■□□□□ 0.08
Pcdhga9Q91XX9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga9Q91XX9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Gm12497-201ENSMUST00000138778 237 ntBASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms