Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.98■□□□□ 0.47
Trex1Q91XB0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.98■□□□□ 0.47
Trex1Q91XB0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.98■□□□□ 0.47
Trex1Q91XB0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.97■□□□□ 0.47
Trex1Q91XB0 Gm45747-201ENSMUST00000212203 999 ntBASIC17.97■□□□□ 0.47
Trex1Q91XB0 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.97■□□□□ 0.47
Trex1Q91XB0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trex1Q91XB0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.97■□□□□ 0.47
Trex1Q91XB0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.96■□□□□ 0.47
Trex1Q91XB0 Gm5177-201ENSMUST00000183092 997 ntBASIC17.96■□□□□ 0.47
Trex1Q91XB0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trex1Q91XB0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trex1Q91XB0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trex1Q91XB0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.95■□□□□ 0.46
Trex1Q91XB0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.95■□□□□ 0.46
Trex1Q91XB0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trex1Q91XB0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms