Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tram1Q91V04 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tram1Q91V04 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tram1Q91V04 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tram1Q91V04 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tram1Q91V04 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Tram1Q91V04 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tram1Q91V04 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Tram1Q91V04 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tram1Q91V04 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tram1Q91V04 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tram1Q91V04 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Tram1Q91V04 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.58□□□□□ -0.24
Tram1Q91V04 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Tram1Q91V04 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.58□□□□□ -0.24
Tram1Q91V04 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.58□□□□□ -0.24
Tram1Q91V04 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.58□□□□□ -0.24
Tram1Q91V04 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Tram1Q91V04 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Tram1Q91V04 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tram1Q91V04 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Gm18421-201ENSMUST00000204122 625 ntBASIC13.57□□□□□ -0.24
Tram1Q91V04 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Tram1Q91V04 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tram1Q91V04 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.56□□□□□ -0.24
Tram1Q91V04 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tram1Q91V04 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.55□□□□□ -0.24
Tram1Q91V04 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tram1Q91V04 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms