Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.6■□□□□ 0.57
StrcQ8VIM6 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.59■□□□□ 0.57
StrcQ8VIM6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Gm18766-201ENSMUST00000189811 808 ntBASIC18.59■□□□□ 0.57
StrcQ8VIM6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Gm43703-201ENSMUST00000200523 763 ntBASIC18.59■□□□□ 0.57
StrcQ8VIM6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Syt7-204ENSMUST00000223586 1344 ntBASIC18.59■□□□□ 0.57
StrcQ8VIM6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
StrcQ8VIM6 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.58■□□□□ 0.57
StrcQ8VIM6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Gm18049-201ENSMUST00000208909 581 ntBASIC18.58■□□□□ 0.57
StrcQ8VIM6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
StrcQ8VIM6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm38225-201ENSMUST00000194001 393 ntBASIC18.58■□□□□ 0.56
StrcQ8VIM6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.58■□□□□ 0.56
StrcQ8VIM6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
StrcQ8VIM6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm6218-201ENSMUST00000219812 628 ntBASIC18.58■□□□□ 0.56
StrcQ8VIM6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.58■□□□□ 0.56
StrcQ8VIM6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Gm43433-201ENSMUST00000196573 481 ntBASIC18.57■□□□□ 0.56
StrcQ8VIM6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.57■□□□□ 0.56
StrcQ8VIM6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Gm25857-201ENSMUST00000082788 129 ntBASIC18.56■□□□□ 0.56
StrcQ8VIM6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
StrcQ8VIM6 Gm29667-201ENSMUST00000190817 490 ntBASIC18.56■□□□□ 0.56
StrcQ8VIM6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
StrcQ8VIM6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.56■□□□□ 0.56
StrcQ8VIM6 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.55■□□□□ 0.56
StrcQ8VIM6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.55■□□□□ 0.56
StrcQ8VIM6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Gm12859-201ENSMUST00000117834 427 ntBASIC18.55■□□□□ 0.56
StrcQ8VIM6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.55■□□□□ 0.56
StrcQ8VIM6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.55■□□□□ 0.56
StrcQ8VIM6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
StrcQ8VIM6 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms