Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H1fooQ8VIK3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H1fooQ8VIK3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
H1fooQ8VIK3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Sybu-209ENSMUST00000228639 4113 ntBASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Mir6404-201ENSMUST00000183699 94 ntBASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
H1fooQ8VIK3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H1fooQ8VIK3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.18□□□□□ -0.3
H1fooQ8VIK3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms