Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.3■□□□□ 0.2
Trim60Q8VI40 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim60Q8VI40 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.29■□□□□ 0.2
Trim60Q8VI40 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Gm15565-201ENSMUST00000118890 427 ntBASIC16.29■□□□□ 0.2
Trim60Q8VI40 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Gm18032-201ENSMUST00000222541 538 ntBASIC16.29■□□□□ 0.2
Trim60Q8VI40 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Gm9987-201ENSMUST00000069768 567 ntBASIC16.29■□□□□ 0.2
Trim60Q8VI40 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim60Q8VI40 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Mir770-201ENSMUST00000103252 94 ntBASIC16.28■□□□□ 0.2
Trim60Q8VI40 Gm9013-201ENSMUST00000132939 882 ntBASIC16.28■□□□□ 0.2
Trim60Q8VI40 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.28■□□□□ 0.2
Trim60Q8VI40 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim60Q8VI40 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim60Q8VI40 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms