Protein–RNA interactions for Protein: Q8VH37

Hdac8, Histone deacetylase 8, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac8Q8VH37 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hdac8Q8VH37 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hdac8Q8VH37 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Gm14494-201ENSMUST00000118786 435 ntBASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hdac8Q8VH37 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gm14722-201ENSMUST00000118943 689 ntBASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gm11594-201ENSMUST00000122313 162 ntBASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gm27300-201ENSMUST00000184085 97 ntBASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gm27335-201ENSMUST00000184758 97 ntBASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hdac8Q8VH37 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms