Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Gm27989-201ENSMUST00000184721 107 ntBASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Gm43433-201ENSMUST00000196573 481 ntBASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lmcd1Q8VEE1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Gm27618-201ENSMUST00000183671 60 ntBASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Gm7653-201ENSMUST00000214567 508 ntBASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Gm18246-201ENSMUST00000221023 728 ntBASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Dancr-204ENSMUST00000132389 2347 ntBASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lmcd1Q8VEE1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Lmcd1Q8VEE1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lmcd1Q8VEE1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm7488-201ENSMUST00000117148 684 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm9385-201ENSMUST00000117563 472 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm12008-201ENSMUST00000117791 755 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.7■□□□□ 0.26
Lmcd1Q8VEE1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lmcd1Q8VEE1 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms