Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Gm11452-201ENSMUST00000122376 690 ntBASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Gm18421-201ENSMUST00000204122 625 ntBASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkd2Q8VE28 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Gm5867-201ENSMUST00000063197 592 ntBASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkd2Q8VE28 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 AW822252-206ENSMUST00000208904 237 ntBASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkd2Q8VE28 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd2Q8VE28 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Nkd2Q8VE28 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Nkd2Q8VE28 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Nkd2Q8VE28 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkd2Q8VE28 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.33□□□□□ -0.11
Nkd2Q8VE28 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd2Q8VE28 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd2Q8VE28 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nkd2Q8VE28 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd2Q8VE28 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkd2Q8VE28 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms