Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rpap2Q8VC34 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rpap2Q8VC34 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpap2Q8VC34 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.27■□□□□ 0.35
Rpap2Q8VC34 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rpap2Q8VC34 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.27■□□□□ 0.35
Rpap2Q8VC34 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.27■□□□□ 0.35
Rpap2Q8VC34 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rpap2Q8VC34 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Gm27459-201ENSMUST00000184860 107 ntBASIC17.25■□□□□ 0.35
Rpap2Q8VC34 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Gm19164-201ENSMUST00000210667 640 ntBASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rpap2Q8VC34 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Gm8097-201ENSMUST00000117903 829 ntBASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Gm43347-201ENSMUST00000200226 580 ntBASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rpap2Q8VC34 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Gm17971-201ENSMUST00000190239 806 ntBASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rpap2Q8VC34 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms