Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdt1Q8R4E9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Gm12350-201ENSMUST00000121208 462 ntBASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.24■□□□□ 0.03
Cdt1Q8R4E9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm27702-201ENSMUST00000184512 56 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44357-201ENSMUST00000195897 142 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm19658-201ENSMUST00000196231 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44367-201ENSMUST00000196836 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44350-201ENSMUST00000197197 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44390-201ENSMUST00000197533 144 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44313-201ENSMUST00000198018 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44486-201ENSMUST00000198508 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44454-201ENSMUST00000198541 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44314-201ENSMUST00000199263 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44394-201ENSMUST00000199558 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44484-201ENSMUST00000199873 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44466-201ENSMUST00000200264 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm44359-201ENSMUST00000200671 138 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdt1Q8R4E9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Gm6736-201ENSMUST00000166583 948 ntBASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdt1Q8R4E9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms