Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Cd109Q8R422 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Cd109Q8R422 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC22.17■■□□□ 1.14
Cd109Q8R422 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cd109Q8R422 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Cd109Q8R422 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC22.16■■□□□ 1.14
Cd109Q8R422 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Gm18889-201ENSMUST00000174284 929 ntBASIC22.16■■□□□ 1.14
Cd109Q8R422 Gm43474-201ENSMUST00000196415 774 ntBASIC22.16■■□□□ 1.14
Cd109Q8R422 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Cd109Q8R422 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cd109Q8R422 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC22.15■■□□□ 1.14
Cd109Q8R422 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Rprl2-201ENSMUST00000157150 290 ntBASIC22.15■■□□□ 1.14
Cd109Q8R422 Gm43125-201ENSMUST00000201724 730 ntBASIC22.15■■□□□ 1.14
Cd109Q8R422 AC139382.1-201ENSMUST00000221402 498 ntBASIC22.15■■□□□ 1.14
Cd109Q8R422 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC22.15■■□□□ 1.14
Cd109Q8R422 Gpr146-202ENSMUST00000053120 1040 ntBASIC22.15■■□□□ 1.14
Cd109Q8R422 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC22.15■■□□□ 1.14
Cd109Q8R422 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cd109Q8R422 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cd109Q8R422 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC22.14■■□□□ 1.14
Cd109Q8R422 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC22.14■■□□□ 1.14
Cd109Q8R422 AC158982.1-201ENSMUST00000228377 901 ntBASIC22.14■■□□□ 1.14
Cd109Q8R422 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cd109Q8R422 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
Cd109Q8R422 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC22.14■■□□□ 1.14
Cd109Q8R422 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cd109Q8R422 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cd109Q8R422 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cd109Q8R422 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Cd109Q8R422 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cd109Q8R422 Gm7901-201ENSMUST00000120430 1597 ntBASIC22.14■■□□□ 1.14
Cd109Q8R422 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC22.14■■□□□ 1.13
Cd109Q8R422 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Cd109Q8R422 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Cd109Q8R422 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cd109Q8R422 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Cd109Q8R422 Gm44872-201ENSMUST00000207864 420 ntBASIC22.14■■□□□ 1.13
Cd109Q8R422 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Cd109Q8R422 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC22.14■■□□□ 1.13
Cd109Q8R422 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Cd109Q8R422 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Cd109Q8R422 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cd109Q8R422 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Cd109Q8R422 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Ntrk2-205ENSMUST00000224402 2284 ntBASIC22.12■■□□□ 1.13
Cd109Q8R422 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
Cd109Q8R422 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Gm13410-201ENSMUST00000117058 1415 ntBASIC22.12■■□□□ 1.13
Cd109Q8R422 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 CT025555.1-201ENSMUST00000225901 1217 ntBASIC22.12■■□□□ 1.13
Cd109Q8R422 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cd109Q8R422 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cd109Q8R422 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms