Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.16□□□□□ -0.14
Ccdc58Q8R3Q6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc58Q8R3Q6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Ccdc58Q8R3Q6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc58Q8R3Q6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc58Q8R3Q6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Gm11539-201ENSMUST00000119837 557 ntBASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Gm27463-201ENSMUST00000183569 57 ntBASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc58Q8R3Q6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms