Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.54□□□□□ -0.08
Rfc3Q8R323 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rfc3Q8R323 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rfc3Q8R323 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.53□□□□□ -0.08
Rfc3Q8R323 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.53□□□□□ -0.08
Rfc3Q8R323 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rfc3Q8R323 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Rfc3Q8R323 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.52□□□□□ -0.09
Rfc3Q8R323 AW822252-206ENSMUST00000208904 237 ntBASIC14.52□□□□□ -0.09
Rfc3Q8R323 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rfc3Q8R323 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Gm7862-201ENSMUST00000121461 292 ntBASIC14.51□□□□□ -0.09
Rfc3Q8R323 Mir5131-201ENSMUST00000175426 93 ntBASIC14.51□□□□□ -0.09
Rfc3Q8R323 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Gm2651-201ENSMUST00000203560 838 ntBASIC14.51□□□□□ -0.09
Rfc3Q8R323 Gm6443-201ENSMUST00000203599 874 ntBASIC14.51□□□□□ -0.09
Rfc3Q8R323 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rfc3Q8R323 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rfc3Q8R323 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms