Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm10576-201ENSMUST00000191927 825 ntBASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Gm13294-201ENSMUST00000121757 1330 ntBASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp7Q8R1T1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp7Q8R1T1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp7Q8R1T1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp7Q8R1T1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp7Q8R1T1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Chmp7Q8R1T1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp7Q8R1T1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp7Q8R1T1 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp7Q8R1T1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Mir1895-201ENSMUST00000122615 79 ntBASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Gm5177-201ENSMUST00000183092 997 ntBASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Gm27494-201ENSMUST00000184735 189 ntBASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Chmp7Q8R1T1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Gm15920-201ENSMUST00000118998 402 ntBASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Auts2-212ENSMUST00000178555 309 ntBASIC20.03■□□□□ 0.8
Chmp7Q8R1T1 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms