Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm7213-201ENSMUST00000215977 950 ntBASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Mir5122-201ENSMUST00000175004 89 ntBASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Nudcd3Q8R1N4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nudcd3Q8R1N4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nudcd3Q8R1N4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Nudcd3Q8R1N4 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.77■□□□□ 0.11
Nudcd3Q8R1N4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nudcd3Q8R1N4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Nudcd3Q8R1N4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 BC037039-201ENSMUST00000192003 2205 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Gm16061-201ENSMUST00000122167 857 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Gm2274-201ENSMUST00000184539 609 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Nudcd3Q8R1N4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Nudcd3Q8R1N4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms