Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Gm12490-201ENSMUST00000120255 560 ntBASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Gm16215-201ENSMUST00000161990 637 ntBASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Gm6257-201ENSMUST00000163864 910 ntBASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Gm44855-201ENSMUST00000205725 362 ntBASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 AC166341.4-201ENSMUST00000220625 123 ntBASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx54Q8K4L0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Gm8410-201ENSMUST00000117225 605 ntBASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx54Q8K4L0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx54Q8K4L0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx54Q8K4L0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.52■□□□□ 0.87
Ddx54Q8K4L0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx54Q8K4L0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ddx54Q8K4L0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 AC125350.2-201ENSMUST00000224737 727 ntBASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ddx54Q8K4L0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ddx54Q8K4L0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Gm6973-201ENSMUST00000117080 721 ntBASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Gm6473-201ENSMUST00000188572 1210 ntBASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ddx54Q8K4L0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.48■□□□□ 0.87
Ddx54Q8K4L0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms