Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clrn1Q8K445 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clrn1Q8K445 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clrn1Q8K445 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clrn1Q8K445 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm12895-201ENSMUST00000122214 226 ntBASIC14.87□□□□□ -0.03
Clrn1Q8K445 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm25406-201ENSMUST00000157599 105 ntBASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.87□□□□□ -0.03
Clrn1Q8K445 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.87□□□□□ -0.03
Clrn1Q8K445 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.87□□□□□ -0.03
Clrn1Q8K445 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clrn1Q8K445 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.86□□□□□ -0.03
Clrn1Q8K445 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.86□□□□□ -0.03
Clrn1Q8K445 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Clrn1Q8K445 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.85□□□□□ -0.03
Clrn1Q8K445 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Gm6257-201ENSMUST00000163864 910 ntBASIC14.85□□□□□ -0.03
Clrn1Q8K445 Gm25745-201ENSMUST00000174945 133 ntBASIC14.85□□□□□ -0.03
Clrn1Q8K445 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clrn1Q8K445 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms