Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Gm37820-201ENSMUST00000194021 2147 ntBASIC9.94□□□□□ -0.82
Cystm1Q8K353 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC9.94□□□□□ -0.82
Cystm1Q8K353 Gm13034-201ENSMUST00000121342 3177 ntBASIC9.93□□□□□ -0.82
Cystm1Q8K353 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Gm43799-201ENSMUST00000201845 579 ntBASIC9.93□□□□□ -0.82
Cystm1Q8K353 Gm3375-201ENSMUST00000203929 796 ntBASIC9.93□□□□□ -0.82
Cystm1Q8K353 Gm30025-201ENSMUST00000218555 728 ntBASIC9.93□□□□□ -0.82
Cystm1Q8K353 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Cystm1Q8K353 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Cystm1Q8K353 Gm10654-201ENSMUST00000098653 1633 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms