Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Gm11950-201ENSMUST00000121615 838 ntBASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Gm44430-201ENSMUST00000203376 995 ntBASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Nckap1lQ8K1X4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nckap1lQ8K1X4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nckap1lQ8K1X4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nckap1lQ8K1X4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nckap1lQ8K1X4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Gm29518-201ENSMUST00000190858 372 ntBASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Gm17808-201ENSMUST00000200859 894 ntBASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1lQ8K1X4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1lQ8K1X4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1lQ8K1X4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms