Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
Syne4Q8CII8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm27430-201ENSMUST00000184585 107 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm44333-201ENSMUST00000197168 107 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm7774-201ENSMUST00000200064 533 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Syne4Q8CII8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.75■□□□□ 0.43
Syne4Q8CII8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.75■□□□□ 0.43
Syne4Q8CII8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.74■□□□□ 0.43
Syne4Q8CII8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Syne4Q8CII8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.73■□□□□ 0.43
Syne4Q8CII8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Syne4Q8CII8 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.72■□□□□ 0.43
Syne4Q8CII8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.72■□□□□ 0.43
Syne4Q8CII8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.72■□□□□ 0.43
Syne4Q8CII8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Syne4Q8CII8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Syne4Q8CII8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms