Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Rftn2Q8CHX7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Gm14722-201ENSMUST00000118943 689 ntBASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Gm12260-201ENSMUST00000122447 411 ntBASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Gm5264-201ENSMUST00000190584 848 ntBASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rftn2Q8CHX7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Gm4899-201ENSMUST00000178708 719 ntBASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rftn2Q8CHX7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rftn2Q8CHX7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms