Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Gm27920-201ENSMUST00000183953 96 ntBASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.2■□□□□ 0.18
Rp1l1Q8CGM2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rp1l1Q8CGM2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm25144-201ENSMUST00000179561 110 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm25352-201ENSMUST00000179815 110 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm9794-201ENSMUST00000202370 423 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm8410-201ENSMUST00000117225 605 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm18737-201ENSMUST00000173594 937 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm27989-201ENSMUST00000184721 107 ntBASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rp1l1Q8CGM2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Gm24694-201ENSMUST00000180054 110 ntBASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Gm27663-201ENSMUST00000184839 110 ntBASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rp1l1Q8CGM2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Gm9824-201ENSMUST00000178707 561 ntBASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rp1l1Q8CGM2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms