Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rbm28Q8CGC6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Rbm28Q8CGC6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rbm28Q8CGC6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Psmb5-202ENSMUST00000227257 622 ntBASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Gm15590-201ENSMUST00000078419 552 ntBASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rbm28Q8CGC6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Gm7222-201ENSMUST00000117512 906 ntBASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Gm8000-201ENSMUST00000188378 592 ntBASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rbm28Q8CGC6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Gm37935-201ENSMUST00000192012 982 ntBASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rbm28Q8CGC6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.54■□□□□ 0.56
Rbm28Q8CGC6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms