Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
Rab43Q8CG50 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.32■□□□□ 0.04
Rab43Q8CG50 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rab43Q8CG50 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.31■□□□□ 0.04
Rab43Q8CG50 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.31■□□□□ 0.04
Rab43Q8CG50 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Gm18489-201ENSMUST00000172565 551 ntBASIC15.31■□□□□ 0.04
Rab43Q8CG50 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.31■□□□□ 0.04
Rab43Q8CG50 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.31■□□□□ 0.04
Rab43Q8CG50 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rab43Q8CG50 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Gm9682-201ENSMUST00000197505 556 ntBASIC15.3■□□□□ 0.04
Rab43Q8CG50 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.3■□□□□ 0.04
Rab43Q8CG50 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rab43Q8CG50 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab43Q8CG50 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rab43Q8CG50 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rab43Q8CG50 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.29■□□□□ 0.04
Rab43Q8CG50 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.29■□□□□ 0.04
Rab43Q8CG50 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rab43Q8CG50 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms