Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc2Q8CG48 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Smc2Q8CG48 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.03■□□□□ 0.48
Smc2Q8CG48 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Smc2Q8CG48 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.02■□□□□ 0.48
Smc2Q8CG48 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Smc2Q8CG48 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc2Q8CG48 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Smc2Q8CG48 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Smc2Q8CG48 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Smc2Q8CG48 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Smc2Q8CG48 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Gm27742-201ENSMUST00000184667 60 ntBASIC18.01■□□□□ 0.47
Smc2Q8CG48 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.01■□□□□ 0.47
Smc2Q8CG48 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms