Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Gm6345-202ENSMUST00000180900 204 ntBASIC19.46■□□□□ 0.71
Smc5Q8CG46 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc5Q8CG46 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Gm9013-201ENSMUST00000132939 882 ntBASIC19.45■□□□□ 0.7
Smc5Q8CG46 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc5Q8CG46 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Gm10013-201ENSMUST00000106074 672 ntBASIC19.44■□□□□ 0.7
Smc5Q8CG46 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Gm6623-201ENSMUST00000173570 544 ntBASIC19.44■□□□□ 0.7
Smc5Q8CG46 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc5Q8CG46 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gm25406-201ENSMUST00000157599 105 ntBASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.43■□□□□ 0.7
Smc5Q8CG46 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.43■□□□□ 0.7
Smc5Q8CG46 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc5Q8CG46 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.43■□□□□ 0.7
Smc5Q8CG46 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Gm43352-201ENSMUST00000196419 3065 ntBASIC19.42■□□□□ 0.7
Smc5Q8CG46 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.42■□□□□ 0.7
Smc5Q8CG46 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc5Q8CG46 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms