Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup88Q8CEC0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Gm43514-201ENSMUST00000198852 424 ntBASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Gm6443-201ENSMUST00000203599 874 ntBASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.56■□□□□ 0.56
Nup88Q8CEC0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup88Q8CEC0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Rprl3-201ENSMUST00000157400 290 ntBASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.55■□□□□ 0.56
Nup88Q8CEC0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Asic1-205ENSMUST00000228185 1818 ntBASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup88Q8CEC0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.54■□□□□ 0.56
Nup88Q8CEC0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.54■□□□□ 0.56
Nup88Q8CEC0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nup88Q8CEC0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms