Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 BC037039-201ENSMUST00000192003 2205 ntBASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vcpip1Q8CDG3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vcpip1Q8CDG3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vcpip1Q8CDG3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vcpip1Q8CDG3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vcpip1Q8CDG3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vcpip1Q8CDG3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Vcpip1Q8CDG3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vcpip1Q8CDG3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vcpip1Q8CDG3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms