Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shisa4Q8CA71 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Shisa4Q8CA71 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Shisa4Q8CA71 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gm7222-201ENSMUST00000117512 906 ntBASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gm43575-201ENSMUST00000196420 516 ntBASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shisa4Q8CA71 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm6736-201ENSMUST00000166583 948 ntBASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm4899-201ENSMUST00000178708 719 ntBASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm5264-201ENSMUST00000190584 848 ntBASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gm5364-201ENSMUST00000216789 889 ntBASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shisa4Q8CA71 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms