Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Gm9949Q8C9F4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Gm6257-201ENSMUST00000163864 910 ntBASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Gm9949Q8C9F4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Gm15165-201ENSMUST00000118140 502 ntBASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Gm17807-201ENSMUST00000186869 298 ntBASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.42□□□□□ -0.42
Gm9949Q8C9F4 Grk6-207ENSMUST00000225925 2769 ntBASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Gm9949Q8C9F4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms