Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Gm27646-201ENSMUST00000183989 110 ntBASIC18.42■□□□□ 0.54
Usp44Q8C2S0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.42■□□□□ 0.54
Usp44Q8C2S0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.42■□□□□ 0.54
Usp44Q8C2S0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Usp44Q8C2S0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.4■□□□□ 0.54
Usp44Q8C2S0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Usp44Q8C2S0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Gm25990-201ENSMUST00000102440 86 ntBASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Gm14722-201ENSMUST00000118943 689 ntBASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Usp44Q8C2S0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Gm6089-201ENSMUST00000197666 938 ntBASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Rps4l-201ENSMUST00000071745 943 ntBASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.38■□□□□ 0.53
Usp44Q8C2S0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms