Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Gm17807-201ENSMUST00000186869 298 ntBASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Gm44454-201ENSMUST00000198541 138 ntBASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gm21362-201ENSMUST00000194272 928 ntBASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sh3rf3Q8C120 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Rprl3-201ENSMUST00000157400 290 ntBASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sh3rf3Q8C120 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Gm25406-201ENSMUST00000157599 105 ntBASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sh3rf3Q8C120 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms