Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trerf1Q8BXJ2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Gm17807-201ENSMUST00000186869 298 ntBASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trerf1Q8BXJ2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trerf1Q8BXJ2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Gm15794-201ENSMUST00000120182 631 ntBASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Gm27357-201ENSMUST00000183754 135 ntBASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.6■□□□□ 0.25
Trerf1Q8BXJ2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Olfr129-201ENSMUST00000122318 993 ntBASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.59■□□□□ 0.25
Trerf1Q8BXJ2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms